Browse of TCMCG057C38390 protein

CDS

Accession Number	TCMCG057C38390
gbkey	CDS
Protein Id	XP_018446040.1
Location	complement(join(1042440..1043282,1044565..1044641,1044829..1044934,1045028..1045156,1045238..1045336,1045417..1045629,1045721..1045843,1045936..1045977))
Gene	LOC108817756
GeneID	108817756
Organism	Raphanus sativus

Protein

Length	543aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA344915
db_source	XM_018590538.1
Definition	PREDICTED: AT-rich interactive domain-containing protein 1-like isoform X1 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category	B
Description	A type II topoisomerase that negatively supercoils closed circular double-stranded DNA in an ATP-dependent manner
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko03032        [VIEW IN KEGG] ko03400        [VIEW IN KEGG]
KEGG_ko	ko:K02470        [VIEW IN KEGG]
EC	5.99.1.3        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	-
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0003916        [VIEW IN EMBL-EBI] GO:0003918        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006259        [VIEW IN EMBL-EBI] GO:0006265        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0006996        [VIEW IN EMBL-EBI] GO:0007059        [VIEW IN EMBL-EBI] GO:0008094        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009295        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0016043        [VIEW IN EMBL-EBI] GO:0016462        [VIEW IN EMBL-EBI] GO:0016787        [VIEW IN EMBL-EBI] GO:0016817        [VIEW IN EMBL-EBI] GO:0016818        [VIEW IN EMBL-EBI] GO:0016853        [VIEW IN EMBL-EBI] GO:0016887        [VIEW IN EMBL-EBI] GO:0017111        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0042623        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044260        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0051276        [VIEW IN EMBL-EBI] GO:0061505        [VIEW IN EMBL-EBI] GO:0071103        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0140097        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTACGGCGGAAGAAGAGTATCACTCCAAGATATCAAAAGGTGTATTTCTCAGGTTAAAGTTTCTATGGAAAGGGAGGTTGACGACCCCAAAAACAAGCTTTATAAAGAATGTTACTATGCTGGAGGCTCAAGCGAATATCTCACTTGCCTCAATCCTGATAAGAAACCACTTCATGAGGTGCTGGGTTTCAAAAAAGAGATGAATGGTATCATCATGGACATTGCACTTCAATGGTACGTTGATGGATACTCAGACACAATGCTAGGATATGCTAATGGCATCCGCACCAACGATGGTGGGACGCATATAGACGGTGTGAAAGCTTCGATAACAAGAACTCTTAACAACTTTGCGAAGAAGTCCAAGTTTCTCAAGGACGAGGATATTACTTTCAGTGGGAAGCATGTTAGGGAAGGACTGACTTGCGTTGTCTCAGTTATTGTTCCAAAGCCTGAGTTTGAAGGTCAAACACAGACGAGATTAGGGAATCCATATATCAGAGAAATTGTCGACCAATCAGTACAGATGTACTTAACGGAGTATTTTGAATTGCATCCAGATGTGCTTGAGAGCATTCTCTCCAAATCTTTGAACGCTTACAAGACTGCATTGGCTATGAAGAAGGCAAGAGATTTGATTAGATCAAGTAGTGTATCAATGCGGTGCACCATTCCTGAGAAACTGACCAACTGCTCTTCTGAAAAACGTGAGATCTCAATAGGCAGAGGAAATAGTTCTGGTGGCGCTGCAAAACATGGTCCTCGCTCTCTTGACAGGCGTTCCCAAAGCAAAAGGACGCGGGAACAGCCTTGGAGTGACGGTGCAGTCTTTACAATTCATGGCAAGTCGTCAGAGGACACTAGCGACTCTAGGTTTGAGAAGAAACGCCAAAAAGTTAAACCCTGTGTTCAATCCTCAAAACCCTGCTTTTCTTCACGGAAAACTGCTGCTGTTTCAGACCCACCAAACCGTAAACCTGCTGCTTCAAAACGACCAAACCGTACCGATGTTAGCGTCAAGACTTTGAATGGTGTAACCCCTGGTTCAGAAAAAACCAAACGTGCAGTTATCCCAGTAGGTGCTGTTTTCCAGGCTGAAATTCCTATTTGGATTGCGCCTACTAAGAAGGGAAAATTCTACGGTAGTCCCGGAGATTCCGACACTCTTAGGTGGCTAGGAACTGGTGTTTGGCCAACTTATAGCCTAAAGAAGAAAGCTCACTACAAAAAAGTAGGGGAAGGAAGAAAGGACACTTGTTCCTATGCTTCTTCAGGATCAACCAATTGCATAAAACAACACATTAAAGAAGCAAGGGAGCTTCTAGAGAAAGATATAGGGCGTGCTTTCTATACTTGGAAGTTTGATCAAATGGGTGAAGAAGTGGGATCAAAATCATGGACTGCCAAAGAAGAGCAAACGTTCAAAGCTCTTGTGAAAGCTAATCCTTTGCCAAGTAAGAAAGGATTTTGGAAACTAGCTTCCAAGGCTTTACCAAGGAAAAGTGAGAAGGATCTCACTAGTTACTACTATAATGTTTTCCTCATCAAACGTATGAGATTGCTTGCTAAGTCTCCTGCTGACAACATGGATAGTGATGATGACCAAAATGATAACTTCTTAGCTGGATGA

Protein:   MYGGRRVSLQDIKRCISQVKVSMEREVDDPKNKLYKECYYAGGSSEYLTCLNPDKKPLHEVLGFKKEMNGIIMDIALQWYVDGYSDTMLGYANGIRTNDGGTHIDGVKASITRTLNNFAKKSKFLKDEDITFSGKHVREGLTCVVSVIVPKPEFEGQTQTRLGNPYIREIVDQSVQMYLTEYFELHPDVLESILSKSLNAYKTALAMKKARDLIRSSSVSMRCTIPEKLTNCSSEKREISIGRGNSSGGAAKHGPRSLDRRSQSKRTREQPWSDGAVFTIHGKSSEDTSDSRFEKKRQKVKPCVQSSKPCFSSRKTAAVSDPPNRKPAASKRPNRTDVSVKTLNGVTPGSEKTKRAVIPVGAVFQAEIPIWIAPTKKGKFYGSPGDSDTLRWLGTGVWPTYSLKKKAHYKKVGEGRKDTCSYASSGSTNCIKQHIKEARELLEKDIGRAFYTWKFDQMGEEVGSKSWTAKEEQTFKALVKANPLPSKKGFWKLASKALPRKSEKDLTSYYYNVFLIKRMRLLAKSPADNMDSDDDQNDNFLAG